Contact Information
Computational Biology Core
Institute for Systems Genomics
67 North Eagleville Road Unit 3197
Storrs, CT 06269-3197
Phone: (860) 486-1324
Email: cbcsupport@uconn.edu
Jill Wegrzyn
CBC Director/Assistant Professor
Vijender Singh
Associate Director
Lead Bioinformatics Scientist
Noah Reid
Bioinformatics Scientist
Neranjan Perera
Bioinformatics Scientist
Mike Wilson
Systems Administrator
Stephen King
Systems Administrator (UCHC)
Online Support
Connect to the CBC team through #bioinformatics_help
uconn-cbc.slack.com
Keep Informed!
Join the Bioinformatics Facility Mailing List to learn about courses, seminars, and related discussion groups.
Coronavirus (COVID19) Update
As the University prepares to slowly bring research back to campus, the Computational Biology Core is working to establish safety guidelines and operational policies so that we can efficiently meet the needs of those who require our genomics services.
The CBC will continue to hold all consultations/appointments via Webex or Zoom. Please contact cbcsupport@uconn.edu to continue to request software installs, server accounts, consultations, or new projects. You may also join the Slack channel to obtain community support: uconn-cbc.slack.com
About Us
The Computational Biology Core (CBC) housed in the Institute for Systems Genomics at the University of Connecticut provides computational power and technical support to UConn researchers and affiliates. We collaborate with the Center for Genome Innovation (CGI) and Proteomics Core to provide full support to the research community.
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News from the CBC
- ISG Computational Biology Core Virtual Workshops-2020The Computational Biology Core within the Institute for Systems Genomics is pleased to announce series of virtual workshops on various topics! The commonly offered data analysis topics are RNAseq (model and non-model species), Variant detection, HPC etc. These workshops are open for researchers from UConn, other academic and non-academic institutes. Please visit the link https://bioinformatics.uconn.edu/cbc-workshops/ […]Posted on October 29, 2020
- Server Upgrades in Progress: Limited Xanadu AccessThe draining of several nodes in preparation for the Xanadu HPC power upgrade and hardware expansion is moving faster than expected. As such, we are currently planning to complete the power upgrade on the morning of July 27th (rather than the previously announced August 4th). To further accommodate job submissions during this time, we have a temporary special queue […]Posted on July 22, 2020
Upcoming Events
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CBC Workshop: Virtual RNA-Seq Analysis (Model Species)
CBC Workshop: Virtual RNA-Seq Analysis (Model Species)
Thursday, March 4th, 2021
09:00 AM - 12:00 PM
Storrs Campus online
The aim of the workshop is to provide understanding of an RNA-Seq study from experimental design to identifying differential expressed genes and their GO term analysis. The workshop will begin by introduction to HPC and Linux programming followed by discussion on High Throughput Sequencing (HTS) and RNA-Seq experimental design. Data Analysis workflow will include Raw reads (fastq) to mapping of reads to reference, Feature Count, Introduction to R, DE analysis and visualization (DESeq2), Biomart and GO analysis. Workshop will cover rational behind the workflow and tools used.
For more information and to register, please visit https://bioinformatics.uconn.edu/cbc-workshops/Contact Information: cbcsupport@uconn.edu
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