Author: Wegrzyn, Jill

CBC’s Data Therapy at Storrs/UCH on Friday, August 1, 2025

Our monthly Data Therapy Session (public office hours) will be held in-person on Friday, August  1st from 9-10am:

We welcome beginners and advanced users to generate a productive discussion! 

Online Support

Connect to the CBC team through the #bioinformatics_help channel at uconn-cbc.slack.com

Register Now: Virtual RNA-seq Analysis Workshop

Register Now: Virtual RNA-seq Analysis Workshop

Join us July 29–31, 2025 for a hands-on Virtual RNA-seq Analysis Workshop designed for researchers working with a reference genome and annotation. Whether you’re new to RNA-seq or looking to sharpen your skills, this workshop provides practical training using real datasets.

You’ll learn the full RNA-seq workflow, including experimental design, sequencing quality control, alignment to a reference genome, differential expression analysis, and gene ontology / gene set enrichment—all from the comfort of your own laptop.

No prior experience? No problem! A self-guided introduction to Linux, HPC, and R will be available two weeks before the workshop to help you get started.

Reserve your spot now: bioinformatics.uconn.edu/cbc-workshops/

Seats are limited—sign up today!

CBC’s Data Therapy at Storrs/UCH on Friday, July 11, 2025

Our monthly Data Therapy Session (public office hours) will be held in-person on Friday, July 11th from 9-10am:

We welcome beginners and advanced users to generate a productive discussion! 

Online Support

Connect to the CBC team through the #bioinformatics_help channel at uconn-cbc.slack.com

Register Now: Virtual Single-Cell Transcriptomics Workshop

Join us June 24–26, 2025, for a hands-on, Virtual Single-Cell Transcriptomics Workshop designed to help you master the fundamentals of scRNA-seq analysis using real data. Whether you’re new to single-cell RNA-seq or looking to build on your experience, this workshop offers guided instruction from raw data processing to biological insights.

Learn how to assess quality, perform clustering, identify cell types, and integrate samples using Jupyter notebooks with Python and R—all from the comfort of your own laptop.

No prior experience? No problem! A self-guided introduction to Linux, HPC, and R will be provided two weeks before the live sessions to help you prepare.

Reserve your spot now: bioinformatics.uconn.edu/cbc-workshops/

Seats are limited—sign up today!

CBC’s Data Therapy at Storrs/UCH on Friday, June 6, 2025

Our monthly Data Therapy Session (public office hours) will be held in-person on Friday, June 6th from 9-10am:

We welcome beginners and advanced users to generate a productive discussion! 

Online Support

Connect to the CBC team through the #bioinformatics_help channel at uconn-cbc.slack.com

Upcoming Virtual Genome Annotation Workshop – Register Now!

Take your bioinformatics skills to the next level with our upcoming Virtual Genome Annotation Workshop, happening May 27–29, 2025! Whether you’re just getting started or want to deepen your expertise, this hands-on workshop offers practical training with real data.

Learn how to validate genome assemblies, perform annotations using tools like Helixer, BRAKER, and EASEL, and evaluate annotation results—all from the comfort of your own laptop.

No prior experience? No problem! The workshop kicks off with an introduction to Linux and high-performance computing (HPC) to get you up to speed.

Reserve your spot now: bioinformatics.uconn.edu/cbc-workshops/

Seats are limited—sign up today!

Upcoming Virtual Variant Detection Workshop – Register Now!

Take your bioinformatics skills to the next level with our upcoming Virtual Variant Detection Workshop, happening May 20–22, 2025! Whether you’re just getting started or want to deepen your expertise, this hands-on workshop offers practical training with real data.

Learn how to prepare genomes, assess sequencing quality, align sequences, and detect variants using FreeBayes, GATK, and bcftools. You’ll also explore functional annotation and data visualization—all from the comfort of your own laptop.

No prior experience? No problem! The workshop kicks off with an introduction to Linux and high-performance computing (HPC) to get you up to speed.

Reserve your spot now: bioinformatics.uconn.edu/cbc-workshops/

Seats are limited—sign up today!

Upcoming Virtual Genome Assembly Workshop – Register Now!

Enhance your bioinformatics skills with our upcoming Virtual Genome Assembly Workshop on April 15-17, 2025! Whether you’re new to genome assembly or looking to refine your expertise, this hands-on training will walk you through sequencing strategies, quality control, and assembly methods.

Learn sequencing techniques, short & long-read assembly, hybrid approaches, and QC best practices—all from your own laptop!

No prior experience? No problem! We’ll start with an intro to Linux and HPC to ensure you’re ready to dive in.

Reserve your spot now: bioinformatics.uconn.edu/cbc-workshops/

Seats are limited—sign up today!

Upcoming Virtual Workshops in April & May – Register Now!

Get ready for two powerful workshops designed to boost your bioinformatics skills! Whether you’re assembling genomes or detecting variants, we’ve got hands-on training to help you dive in.

    • Virtual Genome Assembly Workshop (April 15-17)
      Learn sequencing, quality control, and genome assembly strategies—from short reads to hybrid and long-read assembly.
    • Virtual Variant Detection Workshop (May 20-22)
      Master variant detection with FreeBayes, GATK, and bcftools—covering sequence alignment, filtering, annotation, and more!

No prior experience? No problem! Both workshops start with an intro to Linux and HPC to get you up to speed.

Join us on Zoom from 10 AM – 2 PM EST
Reserve your spot now: https://bioinformatics.uconn.edu/cbc-workshops/

Seats are limited—sign up today!